The activities of Papua Merdeka Organisation (OPM) in Papua has been an issue and causing several losts in both militaries and civilians’ sides in Nduga such as a murder of 31 workers of trans papua road project of PT Istaka Karya by Armed Criminals Group (KKB) because of a KKB anniversary ceremony picture held around the project site taken by one of the workers. KKB is an organisation of native papuans willing to separate from Indonesia. Papua is in a precarious situation (not only about the human protection, but also about the stake position of state integration). The voice of “Freedom of Papua” and the morning star flag indicate distress of an ideology threat in Papua. This research is to analyse the human protection in Yigi District, Nduga Regency towards any ideology threat. The method of this research is descriptive qualitative which describes and analyses findings in the research that is the existence of separatist group originated from Native Papuans (OAP) which is KKB threats the human protection in Yigi District, Nduga Regency. The result shows that civilians in Yigi District, Nduga Regency are victimised by Indonesian Military Force (TNI) existence in quelling KKB which is proven when many mothers and children are frightened when TNI come to their village, and they shoot the TNI as a self-defense from the attack of KKB. Therefore, a synthesis process between defence science and cultural-social atmosphere is needed so the Pancasila ideology is rooted firmly in all levels of Papuan citizens.

Keywords: Human protection; Ideology threat